A simulated perfectly correlated peak-gene pair with multiple biological samples present

This data set is created only for illustrative purposes and is used to test scMultiMap_IRLS() and scMultiMap_WLS(). The source code for generating this data set is in data-raw/ on Github.

Usage

example_pair_bsample

Format

example_pair_bsample

Three lists: The first two list are named 'gene' and 'peak' respectively, each with 2 elements:

counts

A length 2000 vector of gene/peak counts

seq_depths

A length 2000 vector of sequencing depths of scRNA-seq/scATAC-seq

, the third list is named 'bsample' and hosts a length n vector of sample labels